Disease: Metabolic Syndrome X
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2074192
ACE2
0.827 0.160 X 15564667 intron variant C/T snv 0.40 9
rs1232898090
PPARA
0.637 0.600 22 46198429 missense variant G/C;T snv 4.0E-06; 4.0E-06 40
rs738409
PNPLA3
0.557 0.720 22 43928847 missense variant C/G snv 0.28 0.22 88
rs2108622
CYP4F2
0.742 0.280 19 15879621 missense variant C/T snv 0.27 0.22 20
rs429358
APOE
0.590 0.600 19 44908684 missense variant T/C snv 0.14 0.16 66
rs750359414
RETN
0.851 0.240 19 7669884 missense variant C/G;T snv 4.0E-06; 4.0E-06 5
rs768925824
LDLR
0.925 0.040 19 11110693 missense variant G/A snv 4.0E-06 4
rs17782313 0.683 0.480 18 60183864 intergenic variant T/C snv 0.24 34
rs2288775
NEDD4L
1.000 0.040 18 58316132 intron variant A/G snv 0.25 2
rs1267969615
ACE
0.532 0.760 17 63490960 missense variant T/C snv 4.0E-06 100
rs1337503417
KRT16
0.790 0.160 17 41612325 missense variant G/T snv 4.0E-06 12
rs568401628
ACE
0.882 0.120 17 63497280 missense variant C/T snv 4.5E-05 7.0E-06 4
rs11646213 0.827 0.320 16 82609046 intergenic variant A/T snv 0.47 6
rs12149545 0.851 0.080 16 56959249 upstream gene variant G/A snv 0.23 7
rs1558902
FTO
0.827 0.120 16 53769662 intron variant T/A snv 0.31 21
rs1800775
CETP
0.790 0.240 16 56961324 upstream gene variant C/A;G snv 0.51; 5.7E-06 18
rs3764261 0.732 0.280 16 56959412 upstream gene variant C/A snv 0.31 26
rs5882
CETP
0.649 0.400 16 56982180 missense variant G/A;C snv 0.62 35
rs6993
GOT2
0.925 0.080 16 58707463 3 prime UTR variant A/G snv 0.59 3
rs708272
CETP
0.708 0.440 16 56962376 intron variant G/A snv 0.42 0.38 24
rs711752
CETP
1.000 0.040 16 56962299 splice region variant G/A;C snv 10
rs8057044
FTO
0.882 0.080 16 53778702 intron variant G/A snv 0.54 5
rs9925481
CLEC16A
0.882 0.160 16 11003622 intron variant C/G;T snv 5
rs9939609
FTO
0.559 0.720 16 53786615 intron variant T/A snv 0.41 98
rs700518
CYP19A1 ; MIR4713HG
0.732 0.320 15 51236915 synonymous variant T/C snv 0.43 0.40 13